Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015790254.1_cds_XP_016500835.1_1381
CDS Infomation

[gene=LOC107819233] [db_xref=GeneID:107819233] [protein=CTD small phosphatase-like protein 2 isoform X3] [protein_id=XP_016500835.1] [location=join(264274..264427,265144..265241,265376..265472,265575..265718,265803..266078,266849..267186,267362..267580)] [gbkey=CDS]
Sequence

ATGCAGGCTAAGAAAAAATTAAATGGAAGAAATCCACGAGAGCTGGCTAGTCCAAAGGTT
TCAAGACAGCAGCGGAAGATGTCCGAGAATGTACAAACTCGGGCAAAGCAAGTTAAGGAA
CTTATAACATCTACAGCGAGGAAGCAAAAATCAGATCTGGATGTAAGCTTTGGATTGGTG
TCTGATGACACTTCTGCTGCTTCAGACGCACATGATGTTGTTCATGAATATAATACTATT
ACTATTAATAAGGACTATAATGTTGAAACTGATAGTTGCACAAATGATACTATATTTTCT
CCTACCTTCCATCTATCCAGAACTATTGGAGGGGAAATTTCTAACAGAGACATACCCAAA
TTCATCGAGCAAGCAGACCAGCCATTGCAGGAGCCTGGAAAGGAAAATATAGAAGTTGAT
CTGCTGACAGGTCATTTTGCGCTGGACGTGGCTACCGGTATGGATGTGATAGTACATGTG
CTGGTTATGTCAGACATAGGGGGCCAGCATATCTCCTCTGAAGTTTCAGCCGTGCATCTC
TCTATTAAAGATTCAAAACTGGAATGCATTGATGAATTTAATCAAGTTCAGGTGCCTGCT
GATGTTAGTATGGAGGAAGAGGAAACTGAAGAGTTTGATGACTTTGATCCATATTTTTTC
ATAAAGAATTTACCAGACTTGTACTCAGTTGTTCCAACATTTCGGCCTGTGCTATTGCCT
AAACAAACACGGAGTTGCCCATCAACCACTCTTGTTTTGGACTTGGATGAGACCTTGGTG
CACTCTACACTTGAACCTTGTGATGATGCAGATTTCACTTTCTCGGTGAATTTCAACCTG
AAAGATCATAATGTATATGTTCGATGCCGTCCTCATCTTCGGGATTTTATGGATAGAGTA
TCCAGCCTATTTGAGATTATCATATTTACTGCAAGCCAAAGCATTTATGCTGAGAAGCTT
CTGAATGTGCTTGATCCAAAGAGAAAAGTATTTAGGCATCGTGTTTACCGTGAGTCATGT
GTATTTGTTGATGGCAATTACCTTAAAGATCTGTCAGTTCTTGGCCGTGATTTAGCACAT
GTGATTATCATCGACAACTCTCCGCAGGCATTTGGATTCCAGGTGGACAATGGTATTCCA
ATTGAGAGCTGGTTTGATGACCGCTCTGACAATGACTTGCTCTCGTTGCTCCCATTTCTG
GAAAGCTTAGTTGGAGTTGAAGACGTTAGACCAATTATTGCAAGCAAATTCAACCTTCGC
GATAGAATAGCTGCTGCTGCTACTTGTCCTTTTAACTCTATTAGAGGTGATGCATTTGAG
AGATAA

Peptide Sequence

PEP ID

XP_016500835.1
PEP Infomation

PREDICTED: CTD small phosphatase-like protein 2 isoform X3 [Nicotiana tabacum]
Sequence

MQAKKKLNGRNPRELASPKVSRQQRKMSENVQTRAKQVKELITSTARKQKSDLDVSFGLV
SDDTSAASDAHDVVHEYNTITINKDYNVETDSCTNDTIFSPTFHLSRTIGGEISNRDIPK
FIEQADQPLQEPGKENIEVDLLTGHFALDVATGMDVIVHVLVMSDIGGQHISSEVSAVHL
SIKDSKLECIDEFNQVQVPADVSMEEEETEEFDDFDPYFFIKNLPDLYSVVPTFRPVLLP
KQTRSCPSTTLVLDLDETLVHSTLEPCDDADFTFSVNFNLKDHNVYVRCRPHLRDFMDRV
SSLFEIIIFTASQSIYAEKLLNVLDPKRKVFRHRVYRESCVFVDGNYLKDLSVLGRDLAH
VIIIDNSPQAFGFQVDNGIPIESWFDDRSDNDLLSLLPFLESLVGVEDVRPIIASKFNLR
DRIAAAATCPFNSIRGDAFER

Transcript Sequence

Gene sequence data has not been registered.